Class Run

The Exp.Run class describes an experiment run. An experiment run is an application of an experimental protocol to concrete inputs, producing concrete outputs. In object-oriented terminology, a protocol would be a class while a run would be an instance. For more information see additional documentation.

Examples

var result = // ... result of uploading a new assay results file
var data = new LABKEY.Exp.Data(result);

var run = new LABKEY.Exp.Run();
run.name = data.name;
run.properties = { "MyRunProperty" : 3 };
run.dataInputs = [ data ];

data.getContent({
  format: 'jsonTSV',
  success: function (content, format) {
    data.content = content;
    var sheet = content.sheets[0];
    var filedata = sheet.data;

    // transform the file content into the dataRows array used by the run
    run.dataRows = [];
    for (var i = 1; i < filedata.length; i++) {
      var row = filedata[i];
      run.dataRows.push({
        "SampleId": row[0],
        "DataValue": row[1],
        // ... other columns
      });
    }

    var batch = // ... the LABKEY.Exp.RunGroup object
    batch.runs.push(run);
  },
  failure: function (error, format) {
    alert("error: " + error);
  }
});
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